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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs3219487 chr1:45798555 A/G 2.28E-6 113 14.47 40.05 41.7 KM Plot
THYM rs3219493 chr1:45796269 G/C 2.38E-6 113 14.47 38.23 42.82 KM Plot
THYM rs34172679 chr16:24840381 C/T 4.62E-5 112 46.6 27.33 50.1 KM Plot
THYM rs34365165 chr16:24856208 G/A 3.99E-5 113 44.3 27.33 50.1 KM Plot
THYM rs34377239 chr2:33004660 GT/G 1.75E-12 110 46.07 32.45 0.9 KM Plot
THYM rs34397390 chr2:33004907 G/GTCC 1.06E-12 112 46.27 26.57 0.9 KM Plot
THYM rs34656908 chr7:76137924 C/T 2.35E-5 113 40.67 45.87 25.83 KM Plot
THYM rs34657910 chr16:24822320 CAG/C 4.57E-5 112 46.27 28.8 50.1 KM Plot
THYM rs34711168 chr8:82680641 C/A 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs34763358 chr2:32992203 ATT/A 1.06E-12 112 46.6 26.57 0.9 KM Plot
THYM rs34987996 chr2:32995457 T/C 8.29E-13 113 46.43 26.57 0.9 KM Plot
THYM rs35454071 chr8:82698841 G/A 6.7E-5 113 42.25 37.27 22.5 KM Plot
THYM rs35491841 chr2:33004538 C/T 1.06E-12 112 46.27 26.57 0.9 KM Plot
THYM rs35560136 chr16:24788915 T/A 4.16E-5 113 46.43 27.33 50.1 KM Plot
THYM rs35766644 chr2:33031949 C/T 0 108 44.3 23.8 0.13 KM Plot